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BaseInfo

ncRNA ID novel_bra_miR864
Species Brassica rapa
Class miRNA
Genome position ChrA5:12714456-12714600 [-]
Reference genome Brapa_1.0
Source SRR1125021
Length 24
Mature sequence(if miRNA) 122 - AUAAAAGUGUAGGCUUUACCUUGG - 145
Stem-loop(if miRNA) --     A         U  CC       -  UCAGAGA   GA      A   ACCA   AUAUACAU      CC
  AUAAA GUGUAGGCU UA  UUGGGAG AU       AGA  GAGGGA AUA    GAU        GUAGGU  A
  ||||| ||||||||| ||  ||||||| ||       |||  |||||| |||    |||        ||||||
  UAUUU CACAUCCGA GU  AAUCCUC UA       UCU  UUCCCU UGU    CUA        CGUUCA  U
UU     A         U  AU       A  -------   AG      G   -ACC   GUUGAUUU      UA
Stem-loop sequence AUAAAAGUGUAGGCUUUACCUUGGGAGAUUCAGAGAAGAGAGAGGGAAAUAACCAGAUAUAUACAUGUAGGUCCAUAUACUUGCUUUAGUUGAUCCCAUGUGUCCCUUGAUCUAUACUCCUAAUAUGUAGCCUACACAUUUAUUU