ncRNA ID | novel_bra_miR864 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:12714456-12714600 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1125021 |
Length | 24 |
Mature sequence(if miRNA) | 122 - AUAAAAGUGUAGGCUUUACCUUGG - 145 |
Stem-loop(if miRNA) |
--     A         U  CC       -  UCAGAGA   GA      A   ACCA   AUAUACAU      CC   AUAAA GUGUAGGCU UA  UUGGGAG AU       AGA  GAGGGA AUA    GAU        GUAGGU  A   ||||| ||||||||| ||  ||||||| ||       |||  |||||| |||    |||        ||||||   UAUUU CACAUCCGA GU  AAUCCUC UA       UCU  UUCCCU UGU    CUA        CGUUCA  U UU     A         U  AU       A  -------   AG      G   -ACC   GUUGAUUU      UA |
Stem-loop sequence | AUAAAAGUGUAGGCUUUACCUUGGGAGAUUCAGAGAAGAGAGAGGGAAAUAACCAGAUAUAUACAUGUAGGUCCAUAUACUUGCUUUAGUUGAUCCCAUGUGUCCCUUGAUCUAUACUCCUAAUAUGUAGCCUACACAUUUAUUU |