ncRNA ID | novel_bra_miR862 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:18141360-18141404 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485266;SRR1485270;SRR1485274 |
Length | 21 |
Mature sequence(if miRNA) | 25 - CUUGGGUAAACCCUGAACCCU - 45 |
Stem-loop(if miRNA) |
--          CC           CUUGGGUAAA  CUGAACCCU   ||||||||||  ||||||||U   GAACCCAUUU  GAUUUGGGG GG          AA         |
Stem-loop sequence | CUUGGGUAAACCCUGAACCCUUGGGGUUUAGAAUUUACCCAAGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009141754.1 |
|
2.5 | PREDICTED: Brassica rapa pentatricopeptide repeat-containing protein At5g40400 (LOC103863988), mRNA | pentatricopeptide repeat-containing protein At5g40400(LOC103863988) | coding protein | psRNATarget |