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BaseInfo

ncRNA ID novel_bra_miR858
Species Brassica rapa
Class miRNA
Genome position ChrA5:17529752-17529879 [-]
Reference genome Brapa_1.0
Source SRR1485266;SRR1485267
Length 22
Mature sequence(if miRNA) 1 - UUACUUAUUGUCGGUUGACUUU - 22
Stem-loop(if miRNA) --U         UG     A   --A              GA     U AAGU    AAAUA    U
   GUCAACUGA  GUGAG AAG   GGUUCAUGAUUCUU  UAUGG G    GUCU     GGUC U
   |||||||||  ||||| |||   ||||||||||||||  ||||| |    ||||     ||||
   CAGUUGGCU  UAUUC UUC   CCGAGUAUUGAGGG  AUGUC C    UAGA     UCAG U
UUU         GU     A   CAA              AA     U -AAU    ---AG    G
Stem-loop sequence UGUCAACUGAUGGUGAGAAAGAGGUUCAUGAUUCUUGAUAUGGUGAAGUGUCUAAAUAGGUCUUUGGACUGAAGAUUAACUCUGUAAAGGGAGUUAUGAGCCAACCUUACUUAUUGUCGGUUGACUUU