ncRNA ID | novel_bra_miR858 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:17529752-17529879 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485266;SRR1485267 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUACUUAUUGUCGGUUGACUUU - 22 |
Stem-loop(if miRNA) |
--U         UG     A   --A              GA     U AAGU    AAAUA    U    GUCAACUGA  GUGAG AAG   GGUUCAUGAUUCUU  UAUGG G    GUCU     GGUC U    |||||||||  ||||| |||   ||||||||||||||  ||||| |    ||||     ||||    CAGUUGGCU  UAUUC UUC   CCGAGUAUUGAGGG  AUGUC C    UAGA     UCAG U UUU         GU     A   CAA              AA     U -AAU    ---AG    G |
Stem-loop sequence | UGUCAACUGAUGGUGAGAAAGAGGUUCAUGAUUCUUGAUAUGGUGAAGUGUCUAAAUAGGUCUUUGGACUGAAGAUUAACUCUGUAAAGGGAGUUAUGAGCCAACCUUACUUAUUGUCGGUUGACUUU |