ncRNA ID | novel_bra_miR857 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:14066475-14066596 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485266;SRR1485269 |
Length | 21 |
Mature sequence(if miRNA) | 102 - CGUCUGCCGGAAGACUUACAU - 122 |
Stem-loop(if miRNA) |
--         A                            AGGAUUUUAUU        CA   GUAAGUCUU UGGUAGACGACUUACACAUAAGUUUUCU           CCGAGAUU  A   ||||||||| ||||||||||||||||||||||||||||           ||||||||  G   CAUUCAGAA GCCGUCUGCUGAAUGUGUAUUCAGAAGA           GGUUCUAA  U UA         G                            -AGACAUUAUU        AC |
Stem-loop sequence | GUAAGUCUUAUGGUAGACGACUUACACAUAAGUUUUCUAGGAUUUUAUUCCGAGAUUCAAGUCAAAUCUUGGUUAUUACAGAAGAAGACUUAUGUGUAAGUCGUCUGCCGGAAGACUUACAU |