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BaseInfo

ncRNA ID ath-miRf10797-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CUUUUAGGUCGAGCUUCAUUG - NA
Stem-loop(if miRNA)     A UU                    U     CAA         CA       AUUACUAAA   A
AUCU U  UCUUUUAGGUCGAGCUUCAU GGAAC   AUGGUGGCU  UCCAUCU         GCU U
|||| |  |||||||||||||||||||| |||||   |||||||||  |||||||         |||
UAGA A  AGAAAAUCUAGCUCGAAGUG CCUUG   UACUACCGA  AGGUGGA         CGA A
    C UC                    U     UAC         AC       ---------   C
Stem-loop sequence AUCUAUUUUCUUUUAGGUCGAGCUUCAUUGGAACCAAAUGGUGGCUCAUCCAUCUAUUACUAAAGCUAUACAGCAGGUGGACAAGCCAUCAUCAUGUUCCUGUGAAGCUCGAUCUAAAAGACUACAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_112236.1
ncRNA:21   GUUACUUCGAGCUGGAUUUUC   1
  |||||||||||||||||||*|
targets:212   CAAUGAAGCUCGACCUAAAUG   232

1.5 Arabidopsis thaliana F-box and associated interaction domains-containing protein partial mRNA F-box and associated interaction domains-containing protein(AT3G13830) coding protein psRNATarget