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BaseInfo

ncRNA ID novel_bra_miR854
Species Brassica rapa
Class miRNA
Genome position ChrA4:17897147-17897324 [-]
Reference genome Brapa_1.0
Source SRR1485265
Length 21
Mature sequence(if miRNA) 1 - AAUAUGGAGUGAGGUUGGAGA - 21
Stem-loop(if miRNA) --                                               A    A    A     C            G       CAU
  UCCAACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGG AAAU GAGU AUGAA AAAAAAUAAAAG AUUACUC   U
  ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||||
  AGGUUGGAGUGAGGUAUAAAAUGAGGUUUUAACUCUUUUACCUUACC UUUA CUCA UACUU UUUUUUAUUUUC UAAUGAG   U
AG                                               C    C    A     A            G       AUA
Stem-loop sequence UCCAACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGGAAAAUAGAGUAAUGAACAAAAAAUAAAAGGAUUACUCCAUUUAUAGAGUAAUGCUUUUAUUUUUUAUUCAUAACUCCAUUUCCCAUUCCAUUUUCUCAAUUUUGGAGUAAAAUAUGGAGUGAGGUUGGAGA