ncRNA ID | novel_bra_miR854 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:17897147-17897324 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485265 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAUAUGGAGUGAGGUUGGAGA - 21 |
Stem-loop(if miRNA) |
--                                               A    A    A     C            G       CAU   UCCAACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGG AAAU GAGU AUGAA AAAAAAUAAAAG AUUACUC   U   ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||||   AGGUUGGAGUGAGGUAUAAAAUGAGGUUUUAACUCUUUUACCUUACC UUUA CUCA UACUU UUUUUUAUUUUC UAAUGAG   U AG                                               C    C    A     A            G       AUA |
Stem-loop sequence | UCCAACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGGAAAAUAGAGUAAUGAACAAAAAAUAAAAGGAUUACUCCAUUUAUAGAGUAAUGCUUUUAUUUUUUAUUCAUAACUCCAUUUCCCAUUCCAUUUUCUCAAUUUUGGAGUAAAAUAUGGAGUGAGGUUGGAGA |