ncRNA ID | novel_bra_miR852 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA10:10823426-10823481 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485265 |
Length | 24 |
Mature sequence(if miRNA) | 33 - AUAUUGUUGAAACAGAAGGGCACC - 56 |
Stem-loop(if miRNA) |
--                   G A   CA   AUAUUGUUGAAACAGAAGG C CCU  A   ||||||||||||||||||| | |||   UAUGAUAAUUUUGUCUUCU G GGA  A GU                   - -   AA |
Stem-loop sequence | AUAUUGUUGAAACAGAAGGGCACCUCAAAAAAGGGUCUUCUGUUUUAAUAGUAUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018659363.1 |
|
2.5 | PREDICTED: Brassica rapa nudix hydrolase 22, chloroplastic (LOC103867497), transcript variant X5, mRNA | NA | coding protein | psRNATarget |