ncRNA ID | novel_bra_miR849 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:8859607-8859690 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485265;SRR1485271;SRR1485281 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAACAACUCUCCACAAGACAA - 21 |
Stem-loop(if miRNA) |
--                           --       AA  U   UAACAACUCUCCACAAGACAAGCUGUC  ACCAAUU  AC G   |||||||||||||||||||||||||||  |||||||  || C   AUUGUUGAGAGGUGUUCUGUUUGACAG  UGGUUAA  UG A AA                           UG       -C  G |
Stem-loop sequence | UAACAACUCUCCACAAGACAAGCUGUCACCAAUUAAACUGCAGGUCAAUUGGUGUGACAGUUUGUCUUGUGGAGAGUUGUUAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009110804.2 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103834728 (LOC103834728), mRNA | uncharacterized LOC103834728(LOC103834728) | coding protein | psRNATarget |