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BaseInfo

ncRNA ID novel_bra_miR849
Species Brassica rapa
Class miRNA
Genome position ChrA7:8859607-8859690 [+]
Reference genome Brapa_1.0
Source SRR1485265;SRR1485271;SRR1485281
Length 21
Mature sequence(if miRNA) 1 - UAACAACUCUCCACAAGACAA - 21
Stem-loop(if miRNA) --                           --       AA  U
  UAACAACUCUCCACAAGACAAGCUGUC  ACCAAUU  AC G
  |||||||||||||||||||||||||||  |||||||  || C
  AUUGUUGAGAGGUGUUCUGUUUGACAG  UGGUUAA  UG A
AA                           UG       -C  G
Stem-loop sequence UAACAACUCUCCACAAGACAAGCUGUCACCAAUUAAACUGCAGGUCAAUUGGUGUGACAGUUUGUCUUGUGGAGAGUUGUUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009110804.2
ncRNA:21   AACAGAACACCUCUCAACAAU   1
  ***|||||||||||||||*||
targets:133   AGAUCUUGUGGAGAGUUGAUA   153

2.5 PREDICTED: Brassica rapa uncharacterized LOC103834728 (LOC103834728), mRNA uncharacterized LOC103834728(LOC103834728) coding protein psRNATarget