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BaseInfo

ncRNA ID novel_bra_miR848
Species Brassica rapa
Class miRNA
Genome position ChrA7:9004008-9004140 [-]
Reference genome Brapa_1.0
Source SRR1485265
Length 24
Mature sequence(if miRNA) 110 - AGCGGAAUAUAAGAAACUGUCUCU - 133
Stem-loop(if miRNA) --             A               G            AC     UU   C  C     A
  AGCGGAAUAUAAG AACUGUCUCUUAACU UUAACUAAAAAA  UAAGA  CGG UC UAAAU A
  ||||||||||||| ||||||||||||||| ||||||||||||  |||||  ||| || ||||| A
  UCGUCUUAUAUUC UUGGUAGAGAAUUGA AAUUGAUUUUUU  AUUCU  GCC AG AUUUA A
AA             A               A            CA     UG   A  A     A
Stem-loop sequence AGCGGAAUAUAAGAAACUGUCUCUUAACUGUUAACUAAAAAAACUAAGAUUCGGCUCCUAAAUAAAAAAUUUAAGAACCGGUUCUUAACUUUUUUAGUUAAAAGUUAAGAGAUGGUUACUUAUAUUCUGCUAA