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BaseInfo

ncRNA ID novel_bra_miR847
Species Brassica rapa
Class miRNA
Genome position ChrA7:1881978-1882159 [+]
Reference genome Brapa_1.0
Source SRR1485265
Length 24
Mature sequence(if miRNA) 1 - UACGUAGCGACCGAGCUCGAGCCU - 24
Stem-loop(if miRNA) --                UC  GCCUA   -     CUC    G         GUCC U   --        A           C    C UC
  UACGUAGCGACCGAGC  GA     GCU GGUCG   UGUA CGACCGAGC    G CUC  GCUCGGUC CUGCGUAGCGA CGAG G  C
  ||||||||||||||||  ||     ||| |||||   |||| |||||||||    | |||  |||||||| ||||||||||| |||| |  A
  AUGCAUCGCUGGCUCG  CU     CGA CCAGC   GCAU GCUGGCUCG    C GAG  CGAGCCAG GAUGCAUCGCU GCUC C  U
CG                CC  GCCUG   A     AAU    A         -AAC -   CU        C           A    A CC
Stem-loop sequence UACGUAGCGACCGAGCUCGAGCCUAGCUGGUCGCUCUGUAGCGACCGAGCGUCCGUCUCGCUCGGUCACUGCGUAGCGACCGAGCGUCCAUCCCACUCGAUCGCUACGUAGCGACCGAGCUCGAGCCAAGCUCGGUCGAUACGUAACGACCAAGCGUCCGUCCCGCUCGGUCGCUACGUAGC