| ncRNA ID | novel_bra_miR846 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA4:17897146-17897325 [-] |
| Reference genome | Brapa_1.0 |
| Source | SRR1485264 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAAAUAUGGAGUGAGGUUGGAGAU - 24 |
| Stem-loop(if miRNA) |
-- A A A C G CAU CUCCAACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGG AAAU GAGU AUGAA AAAAAAUAAAAG AUUACUC U |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||| ||||||| GAGGUUGGAGUGAGGUAUAAAAUGAGGUUUUAACUCUUUUACCUUACC UUUA CUCA UACUU UUUUUUAUUUUC UAAUGAG U UA C C A A G AUA |
| Stem-loop sequence | CUCCAACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGGAAAAUAGAGUAAUGAACAAAAAAUAAAAGGAUUACUCCAUUUAUAGAGUAAUGCUUUUAUUUUUUAUUCAUAACUCCAUUUCCCAUUCCAUUUUCUCAAUUUUGGAGUAAAAUAUGGAGUGAGGUUGGAGAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018655293.1 |
|
2.5 | PREDICTED: Brassica rapa 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase 1-like (LOC103845591), transcript variant X3, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_018653025.1 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC108869048 (LOC108869048), mRNA | NA | coding protein | psRNATarget |