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BaseInfo

ncRNA ID	ath-miRf10796-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - ACGACGGCGUUUAGAUGAAG - NA
Stem-loop(if miRNA)	G       G     AGA  AA      GUUUGCGAAA      G   U   G CGA AACGACG CGUUU   UG  GUUAGG          AUGACG ACA UGA G ||| ||||||| |||||   ||  ||||||          |||||| ||| ||| GUU UUGCUGC GCAAA   AC  CAGUCC          UGCUGU UGU GCU A    G       A     GUA  --      ----------      G   C   A
Stem-loop sequence	CGAGAACGACGGCGUUUAGAUGAAGUUAGGGUUUGCGAAAAUGACGGACAUUGAGGAAUCGCUGUGUGUCGUCCUGACCAAUGAAACGACGUCGUUGUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_114575.5	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   |||||||||||||||||||| targets:408   CUUCAUCUAAACGCCGUCGU   427 Target Full Sequence	0.0	Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like superfamily protein mRNA	Tetratricopeptide repeat (TPR)-like superfamily protein(AT3G47080)	coding protein	psRNATarget
AY039956.1	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   |||||||||||||||||||| targets:243   CUUCAUCUAAACGCCGUCGU   262 Target Full Sequence	0.0	Arabidopsis thaliana unknown protein (At3g47080) mRNA, complete cds	NA	coding protein	psRNATarget
AY079400.1	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   |||||||||||||||||||| targets:92   CUUCAUCUAAACGCCGUCGU   111 Target Full Sequence	0.0	Arabidopsis thaliana unknown protein (At3g47080) mRNA, complete cds	NA	coding protein	psRNATarget
NM_113177.4	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   |||||||||||||||||=|* targets:1059   CUUCAUCUAAACGCCGUUGC   1078 Target Full Sequence	2.5	Arabidopsis thaliana Tesmin/TSO1-like CXC domain-containing protein (TSO1), mRNA	Tesmin/TSO1-like CXC domain-containing protein(TSO1)	coding protein	psRNATarget
AF206324.1	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   |||||||||||||||||=|* targets:1056   CUUCAUCUAAACGCCGUUGC   1075 Target Full Sequence	2.5	Arabidopsis thaliana putative DNA binding protein (tso1) mRNA, tso1-3 allele, complete cds	NA	coding protein	psRNATarget
AF204059.1	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   |||||||||||||||||=|* targets:976   CUUCAUCUAAACGCCGUUGC   995 Target Full Sequence	2.5	Arabidopsis thaliana CXC domain protein TSO1 (TSO1) mRNA, complete cds	NA	coding protein	psRNATarget
AY046019.1	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   |||||||||||||||||=|* targets:459   CUUCAUCUAAACGCCGUUGC   478 Target Full Sequence	2.5	Arabidopsis thaliana putative DNA binding protein (At3g22780) mRNA, complete cds	NA	coding protein	psRNATarget
AY142642.1	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   |||||||||||||||||=|* targets:427   CUUCAUCUAAACGCCGUUGC   446 Target Full Sequence	2.5	Arabidopsis thaliana putative DNA binding protein (At3g22780) mRNA, complete cds	NA	coding protein	psRNATarget
BX823051.1	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   |||||||||||||||||=|* targets:68   CUUCAUCUAAACGCCGUUGC   87 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZD09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX823819.1	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   |||||||||||||||||=|* targets:33   CUUCAUCUAAACGCCGUUGC   52 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZB04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_115178.6	ncRNA:20   GA-AGUAGAUUUGCGGCAGCA   1   ||-||*||||||||||||||| targets:47   CUCUCCUCUAAACGCCGUCGU   67 Target Full Sequence	3.0	Arabidopsis thaliana nodulin/glutamine synthase-like protein (NodGS), mRNA	nodulin/glutamine synthase-like protein(NodGS)	coding protein	psRNATarget
NM_120392.4	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   =|**|||||||||||||||| targets:936   UUGGAUCUAAACGCCGUCGU   955 Target Full Sequence	3.0	Arabidopsis thaliana Concanavalin A-like lectin protein kinase family protein mRNA	Concanavalin A-like lectin protein kinase family protein(AT5G03140)	coding protein	psRNATarget
AK227062.1	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   =|**|||||||||||||||| targets:634   UUGGAUCUAAACGCCGUCGU   653 Target Full Sequence	3.0	Arabidopsis thaliana mRNA for receptor like protein kinase, complete cds, clone: RAFL09-62-B22	NA	coding protein	psRNATarget
AY093212.1	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   =|**|||||||||||||||| targets:560   UUGGAUCUAAACGCCGUCGU   579 Target Full Sequence	3.0	Arabidopsis thaliana receptor like protein kinase (At5g03140) mRNA, complete cds	NA	coding protein	psRNATarget
BT008791.1	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   =|**|||||||||||||||| targets:502   UUGGAUCUAAACGCCGUCGU   521 Target Full Sequence	3.0	Arabidopsis thaliana At5g03140 gene, complete cds	NA	coding protein	psRNATarget
BX829516.1	ncRNA:20   GAAGUAGAUUUGCGGCAGCA   1   =|**|||||||||||||||| targets:563   UUGGAUCUAAACGCCGUCGU   582 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget