ncRNA ID | novel_bra_miR839 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:19528996-19529096 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485263 |
Length | 24 |
Mature sequence(if miRNA) | 78 - AUACCGUCUAACCGUAUAACGCCU - 101 |
Stem-loop(if miRNA) |
---AUAC        C      C ----C    A      C     -----CUC G        CGUCUAAC GUAUAA G     CUAG GCCUAA CGUAU        G A        |||||||| |||||| |     |||| |||||| |||||        |        GUAGAUUG CGUAUU C     GAUC CGGAUU GCAUA        C A UAUGUCA        -      A UUACA    G      A     UACAAAUC A |
Stem-loop sequence | AUACCGUCUAACCGUAUAACGCCUAGAGCCUAACCGUAUCUCGGAAACCUAAACAUAUACGAUUAGGCGCUAGACAUUCAUUAUGCGUUAGAUGACUGUAU |