ncRNA ID | novel_bra_miR837 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:5386257-5386410 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485263 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGGUCCAAUUGUACAUGUAAU - 21 |
Stem-loop(if miRNA) |
--                                  AUU     UA     -- AG  UAUAUGAUUGUAAAAUUGUAC   UGGUCCAAUUGUACAUGUAAUUUAAGUUGGUUUA   CGGUU  GUGCA  G  UA                     A   ||||||||||||||||||||||||||||||||||   |||||  |||||  |  ||   ACCAGGUUAACAUGUACAUUAAAUUCAACCAAAU   GUUAG  UAGAU  G  AC                     U AU                                  CAU     UA     GA --  GUGAUUUGGUUGAAUUUAAUG |
Stem-loop sequence | UGGUCCAAUUGUACAUGUAAUUUAAGUUGGUUUAAUUCGGUUUAGUGCAGAGUAUAUAUGAUUGUAAAAUUGUACAUGUAAUUUAAGUUGGUUUAGUGCAGAGUAGAUAUGAUUGUACUAAACCAACUUAAAUUACAUGUACAAUUGGACCAUA |