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BaseInfo

ncRNA ID novel_bra_miR837
Species Brassica rapa
Class miRNA
Genome position ChrA2:5386257-5386410 [+]
Reference genome Brapa_1.0
Source SRR1485263
Length 21
Mature sequence(if miRNA) 1 - UGGUCCAAUUGUACAUGUAAU - 21
Stem-loop(if miRNA) --                                  AUU     UA     -- AG  UAUAUGAUUGUAAAAUUGUAC
  UGGUCCAAUUGUACAUGUAAUUUAAGUUGGUUUA   CGGUU  GUGCA  G  UA                     A
  ||||||||||||||||||||||||||||||||||   |||||  |||||  |  ||
  ACCAGGUUAACAUGUACAUUAAAUUCAACCAAAU   GUUAG  UAGAU  G  AC                     U
AU                                  CAU     UA     GA --  GUGAUUUGGUUGAAUUUAAUG
Stem-loop sequence UGGUCCAAUUGUACAUGUAAUUUAAGUUGGUUUAAUUCGGUUUAGUGCAGAGUAUAUAUGAUUGUAAAAUUGUACAUGUAAUUUAAGUUGGUUUAGUGCAGAGUAGAUAUGAUUGUACUAAACCAACUUAAAUUACAUGUACAAUUGGACCAUA