ncRNA ID | ath-miRf10795-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - CUCUGUGGGAGAAGUUCCUU - NA |
Stem-loop(if miRNA) |
     C            GUUCC    U  ----A     A  UAUAUCCUCUGAGGAAUUUAGUUAUCAUUGCCUCUAGU GAGUU UCUGUGGGAGAA     UUGU AC     UCAGA GG                                      U ||||| ||||||||||||     |||| ||     ||||| || CUCAG AGACACUCUCUU     GAUA UG     CUUUG GA                                      U      U            GUUUU    U  CUAUU     -  CUAGUUUGGUGGACCUUCGAGAGGUCAAGGGGUUGUGU |
Stem-loop sequence | GAGUUCUCUGUGGGAGAAGUUCCUUGUUACAUCAGAAGGUAUAUCCUCUGAGGAAUUUAGUUAUCAUUGCCUCUAGUUUUGUGUUGGGGAACUGGAGAGCUUCCAGGUGGUUUGAUCAGGUUUCUUAUCGUUAUAGUUUUGUUCUCUCACAGAUGACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AJ007588.1 |
|
1.5 | Arabidopsis thaliana mRNA for monooxygenase 2 | NA | coding protein | psRNATarget | |||||||||
NM_120015.3 |
|
1.5 | Arabidopsis thaliana FAD/NAD(P)-binding oxidoreductase family protein mRNA | FAD/NAD(P)-binding oxidoreductase family protein(AT4G38540) | coding protein | psRNATarget | |||||||||
BX832191.1 |
|
2.5 | Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) | NA | coding protein | psRNATarget | |||||||||
NM_001342876.1 |
|
2.5 | Arabidopsis thaliana ARM repeat superfamily protein mRNA | ARM repeat superfamily protein(AT5G06350) | coding protein | psRNATarget | |||||||||
NM_120718.4 |
|
2.5 | Arabidopsis thaliana ARM repeat superfamily protein mRNA | ARM repeat superfamily protein(AT5G06350) | coding protein | psRNATarget |