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BaseInfo

ncRNA ID ath-miRf10795-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CUCUGUGGGAGAAGUUCCUU - NA
Stem-loop(if miRNA)      C            GUUCC    U  ----A     A  UAUAUCCUCUGAGGAAUUUAGUUAUCAUUGCCUCUAGU
GAGUU UCUGUGGGAGAA     UUGU AC     UCAGA GG                                      U
||||| ||||||||||||     |||| ||     ||||| ||
CUCAG AGACACUCUCUU     GAUA UG     CUUUG GA                                      U
     U            GUUUU    U  CUAUU     -  CUAGUUUGGUGGACCUUCGAGAGGUCAAGGGGUUGUGU
Stem-loop sequence GAGUUCUCUGUGGGAGAAGUUCCUUGUUACAUCAGAAGGUAUAUCCUCUGAGGAAUUUAGUUAUCAUUGCCUCUAGUUUUGUGUUGGGGAACUGGAGAGCUUCCAGGUGGUUUGAUCAGGUUUCUUAUCGUUAUAGUUUUGUUCUCUCACAGAUGACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AJ007588.1
ncRNA:20   UUCCUUGAAGAGGGUGUCUC   1
  *|||||||*|||||||||||
targets:259   CAGGAACUCCUCCCACAGAG   278

1.5 Arabidopsis thaliana mRNA for monooxygenase 2 NA coding protein psRNATarget
NM_120015.3
ncRNA:20   UUCCUUGAAGAGGGUGUCUC   1
  *|||||||*|||||||||||
targets:317   CAGGAACUCCUCCCACAGAG   336

1.5 Arabidopsis thaliana FAD/NAD(P)-binding oxidoreductase family protein mRNA FAD/NAD(P)-binding oxidoreductase family protein(AT4G38540) coding protein psRNATarget
BX832191.1
ncRNA:20   UUCCUUGAAGAGGGUGUCUC   1
  |||||||||||*|||||||*
targets:383   AAGGAACUUCUGCCACAGAC   402

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
NM_001342876.1
ncRNA:20   UUCCUUGAAGAGGGUGUCUC   1
  |||||||||||*|||||||*
targets:475   AAGGAACUUCUGCCACAGAC   494

2.5 Arabidopsis thaliana ARM repeat superfamily protein mRNA ARM repeat superfamily protein(AT5G06350) coding protein psRNATarget
NM_120718.4
ncRNA:20   UUCCUUGAAGAGGGUGUCUC   1
  |||||||||||*|||||||*
targets:490   AAGGAACUUCUGCCACAGAC   509

2.5 Arabidopsis thaliana ARM repeat superfamily protein mRNA ARM repeat superfamily protein(AT5G06350) coding protein psRNATarget