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BaseInfo

ncRNA ID	novel_bra_miR834
Species	Brassica rapa
Class	miRNA
Genome position	ChrA1:26082886-26083113 [-]
Reference genome	Brapa_1.0
Source	SRR1485263
Length	24
Mature sequence(if miRNA)	1 - AGAGAGAACUCAUAAUGGAGGGGU - 24
Stem-loop(if miRNA)	--                                   C                                         A  C   UC     UG                C U   CCCUCCAUUAUGAGUUCUCUCUAACUCCAUAAUUA GUUGUUGGUGAGUCUCGAACCCAGGACCUCACCCUUUAACA CA UCC  CAGGA  AGUUGUCACCAAUUGA C G   ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||  |||||  |||||||||||||||| |   GGGAGGUAAUACUCAAGAGAGAUUGAGGUAUUAAU CAACAACCACUCGGAGUUUGGGUCCUGGAGUGGGAAAUUGU GU AGG  GUCCU  UCGACAGUGGUUAACU G C UG                                   C                                         C  A   GU     GU                A A
Stem-loop sequence	CCCUCCAUUAUGAGUUCUCUCUAACUCCAUAAUUACGUUGUUGGUGAGUCUCGAACCCAGGACCUCACCCUUUAACAACACUCCUCCAGGAUGAGUUGUCACCAAUUGACCUGCAGAUCAAUUGGUGACAGCUUGUCCUGUGGGAAUGCUGUUAAAGGGUGAGGUCCUGGGUUUGAGGCUCACCAACAACCUAAUUAUGGAGUUAGAGAGAACUCAUAAUGGAGGGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009153361.2	ncRNA:24   UGGGGAGGUAAUACUCAAGAGAGA   1   *==|=|||*|||||||||=||||| targets:341   UUUCUUCCCUUAUGAGUUUUCUCU   364 Target Full Sequence	2.5	PREDICTED: Brassica rapa FT-interacting protein 1 (LOC103874926), mRNA	FT-interacting protein 1(LOC103874926)	coding protein	psRNATarget