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BaseInfo

ncRNA ID novel_bra_miR828
Species Brassica rapa
Class miRNA
Genome position ChrA7:6767582-6767741 [-]
Reference genome Brapa_1.0
Source SRR1485263
Length 24
Mature sequence(if miRNA) 1 - UAUAGAGUGAACCAUUGAAGCAAA - 24
Stem-loop(if miRNA) --                                             U            U           C      U
  UGCUUCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGU AAAUAUAGAGUA UCUUAUUUUUU ACUCUA A
  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||
  ACGAAGUUACCAAGUGAGAUAUUAUCUCAAUGAGAUAUUAUCUCA UUUAUAUCUCAU AGGAUAAAAAA UGAGGU U
AA                                             C            U           A      U
Stem-loop sequence UGCUUCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUUAAAUAUAGAGUAUUCUUAUUUUUUCACUCUAUAUUUGGAGUAAAAAAAUAGGAUUACUCUAUAUUUCACUCUAUUAUAGAGUAACUCUAUUAUAGAGUGAACCAUUGAAGCAAA