ncRNA ID | novel_bra_miR828 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:6767582-6767741 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485263 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUAGAGUGAACCAUUGAAGCAAA - 24 |
Stem-loop(if miRNA) |
--                                             U            U           C      U   UGCUUCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGU AAAUAUAGAGUA UCUUAUUUUUU ACUCUA A   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||   ACGAAGUUACCAAGUGAGAUAUUAUCUCAAUGAGAUAUUAUCUCA UUUAUAUCUCAU AGGAUAAAAAA UGAGGU U AA                                             C            U           A      U |
Stem-loop sequence | UGCUUCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUUAAAUAUAGAGUAUUCUUAUUUUUUCACUCUAUAUUUGGAGUAAAAAAAUAGGAUUACUCUAUAUUUCACUCUAUUAUAGAGUAACUCUAUUAUAGAGUGAACCAUUGAAGCAAA |