| ncRNA ID | novel_bra_miR821 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA4:16660959-16661057 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1485262;SRR1485263 |
| Length | 21 |
| Mature sequence(if miRNA) | 79 - AUUUAGAAUUUAUGAUUUAUC - 99 |
| Stem-loop(if miRNA) |
-- C C A C - ---- C UAAAUCAUAAA UCUAAAUC AAAACA UAAAC CUAAA UC ACU A ||||||||||| |||||||| |||||| ||||| ||||| || ||| AUUUAGUAUUU AGAUUUAG UUUUGU AUUUG GAUUU AG UGG A CU A U G U U UAUU G |
| Stem-loop sequence | UAAAUCAUAAACUCUAAAUCCAAAACAAUAAACCCUAAAUCACUCAAGGGUUUAUGAUUUUAGUGUUUAGUGUUUUUGAUUUAGAAUUUAUGAUUUAUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009151714.2 |
|
2.5 | PREDICTED: Brassica rapa serine/threonine-protein phosphatase PP1 isozyme 2 (LOC103873291), mRNA | serine/threonine-protein phosphatase PP1 isozyme 2(LOC103873291) | coding protein | psRNATarget | |||||||||
| XM_009114213.2 |
|
2.5 | PREDICTED: Brassica rapa chaperone protein dnaJ 11, chloroplastic-like (LOC103837831), mRNA | chaperone protein dnaJ 11, chloroplastic-like(LOC103837831) | coding protein | psRNATarget |