| ncRNA ID | novel_bra_miR820 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA3:10877266-10877377 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1485262 |
| Length | 21 |
| Mature sequence(if miRNA) | 92 - AUUUAGAAUUUAUGAUUUAUC - 112 |
| Stem-loop(if miRNA) |
-- C C GACUAC CA CAA AGG UAAAUC UAAA UCUAAAUCAAAAA ACACUAAAA CU GGGUUU G |||||| |||| ||||||||||||| ||||||||| || |||||| AUUUAG AUUU AGAUUUAGUUUUU UGUGAUUUU GA UUUAGG U CU U A -ACAAU AG --- AUU |
| Stem-loop sequence | UAAAUCCUAAACUCUAAAUCAAAAAGACUACACACUAAAACACUCAAGGGUUUAGGGUUUAGGAUUUAGGAUUUUAGUGUUAACAUUUUUGAUUUAGAAUUUAUGAUUUAUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009151714.2 |
|
2.5 | PREDICTED: Brassica rapa serine/threonine-protein phosphatase PP1 isozyme 2 (LOC103873291), mRNA | serine/threonine-protein phosphatase PP1 isozyme 2(LOC103873291) | coding protein | psRNATarget | |||||||||
| XM_009114213.2 |
|
2.5 | PREDICTED: Brassica rapa chaperone protein dnaJ 11, chloroplastic-like (LOC103837831), mRNA | chaperone protein dnaJ 11, chloroplastic-like(LOC103837831) | coding protein | psRNATarget |