| ncRNA ID | novel_bra_miR819 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA3:20890799-20890916 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1485262;SRR1485265;SRR1485279 |
| Length | 23 |
| Mature sequence(if miRNA) | 1 - AAUGAGAUCCUCGGAAUAUUCCA - 23 |
| Stem-loop(if miRNA) |
---A GA A A -CAACAAAU C A A AUGA UCCUCGG AU UUC UUCCGAGGAAAUUC GAGGAA CCCA A |||| ||||||| || ||| |||||||||||||| |||||| |||| A UACU AGGAGUC UA AAG AAGGCUCCUUUAAG CUCCUU GGGU U UUUA AA A - UAGCCAUAU A G U |
| Stem-loop sequence | AAUGAGAUCCUCGGAAUAUUCCAACAAAUUUCCGAGGAAAUUCCGAGGAAACCCAAAAUUUGGGGUUCCUCAGAAUUUCCUCGGAAUAUACCGAUGAAAUACUGAGGAAAUCAUAUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009144452.2 |
|
2.5 | PREDICTED: Brassica rapa macro domain-containing protein VPA0103-like (LOC103866509), transcript variant X2, mRNA | macro domain-containing protein VPA0103-like(LOC103866509) | coding protein | psRNATarget | |||||||||
| XM_009144451.2 |
|
2.5 | PREDICTED: Brassica rapa macro domain-containing protein VPA0103-like (LOC103866509), transcript variant X1, mRNA | macro domain-containing protein VPA0103-like(LOC103866509) | coding protein | psRNATarget |