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BaseInfo

ncRNA ID novel_bra_miR817
Species Brassica rapa
Class miRNA
Genome position ChrA2:8885313-8885444 [-]
Reference genome Brapa_1.0
Source SRR1485262
Length 24
Mature sequence(if miRNA) 109 - AGCGGAAUAUAAGAAUCUGUCUCU - 132
Stem-loop(if miRNA) --   G            C                          C   A        C    UAA
  AGC GAAUAUAAGAAU UGUCUCUUAAUUUUUAACUGAAAAAG UAA AAUUGGUU UUAA   G
  ||| |||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||
  UCG CUUAUAUUCUUA ACAGAGAAUUGAAAAUUGAUUUUUUC AUU UUGGCCAA AAUU   A
AA   A            A                          A   C        A    UAU
Stem-loop sequence AGCGGAAUAUAAGAAUCUGUCUCUUAAUUUUUAACUGAAAAAGCUAAAAAUUGGUUCUUAAUAAGAUAUUUAAAAACCGGUUCUUAACUUUUUUAGUUAAAAGUUAAGAGACAAAUUCUUAUAUUCAGCUAA