ncRNA ID | novel_bra_miR817 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:8885313-8885444 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485262 |
Length | 24 |
Mature sequence(if miRNA) | 109 - AGCGGAAUAUAAGAAUCUGUCUCU - 132 |
Stem-loop(if miRNA) |
--   G            C                          C   A        C    UAA   AGC GAAUAUAAGAAU UGUCUCUUAAUUUUUAACUGAAAAAG UAA AAUUGGUU UUAA   G   ||| |||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||   UCG CUUAUAUUCUUA ACAGAGAAUUGAAAAUUGAUUUUUUC AUU UUGGCCAA AAUU   A AA   A            A                          A   C        A    UAU |
Stem-loop sequence | AGCGGAAUAUAAGAAUCUGUCUCUUAAUUUUUAACUGAAAAAGCUAAAAAUUGGUUCUUAAUAAGAUAUUUAAAAACCGGUUCUUAACUUUUUUAGUUAAAAGUUAAGAGACAAAUUCUUAUAUUCAGCUAA |