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BaseInfo

ncRNA ID novel_bra_miR815
Species Brassica rapa
Class miRNA
Genome position ChrA9:12964461-12964591 [-]
Reference genome Brapa_1.0
Source SRR1485262
Length 24
Mature sequence(if miRNA) 108 - AGCGGAAUAUAAGAAAUCGUCUCU - 131
Stem-loop(if miRNA) --A                   C C    C              --   U                
   GCGGAAUAUAAGAAAUCGU U UUAA UUUUAACUAAAAAA  UAA AACCGGCUCUUAAAUAU
   ||||||||||||||||||| | |||| ||||||||||||||  ||| ||||||||||||||||C
   UGUCUUAUAUUCUUUGGCA A AAUU AAAAUUGAUUUUUU  AUU UUGGCCGAGAAUUUAUU
AAA                   A A    A              UG   C                
Stem-loop sequence AGCGGAAUAUAAGAAAUCGUCUCUUAACUUUUAACUAAAAAAUAAUAACCGGCUCUUAAAUAUCUUAUUUAAGAGCCGGUUCUUAGUUUUUUUAGUUAAAAAUUAAAAAACGGUUUCUUAUAUUCUGUAAA