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BaseInfo

ncRNA ID	ath-miRf10793-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AAAGUCUUUUUCUCCUUCAC - NA
Stem-loop(if miRNA)	--A   AAUCGCAUUGGUGGAAG AGAUUUGAGGAAAGUCUUUUUCUCCUUCACGGCUAGCAUCA   CAA                 U |||||||||||||||||||||||||||||||||||||||||   ||| UCUAAACUCCUUUCAGGAAAAGAGGAAGUGCCGAUCGUAGU   CAU                 U                                          AAA   CUGAACGAAAACCUGUU
Stem-loop sequence	AGAUUUGAGGAAAGUCUUUUUCUCCUUCACGGCUAGCAUCAACAAAAUCGCAUUGGUGGAAGUUUUGUCCAAAAGCAAGUCUACAAAUGAUGCUAGCCGUGAAGGAGAAAAGGACUUUCCUCAAAUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_118771.1	ncRNA:20   CACUUCCUCUUUUUCUGAAA   1   *||*|||||||||||||||| targets:1535   AUGCAGGAGAAAAAGACUUU   1554 Target Full Sequence	1.0	Arabidopsis thaliana Cysteine/Histidine-rich C1 domain family protein partial mRNA	Cysteine/Histidine-rich C1 domain family protein(AT4G26380)	coding protein	psRNATarget
NM_118441.1	ncRNA:20   CACUUCCUCUUUUUCUGAAA   1   |||||||||*|||||||||| targets:616   GUGAAGGAGCAAAAGACUUU   635 Target Full Sequence	1.5	Arabidopsis thaliana Bromo-adjacent homology (BAH) domain-containing protein partial mRNA	Bromo-adjacent homology (BAH) domain-containing protein(AT4G23120)	coding protein	psRNATarget
NM_111645.3	ncRNA:20   CACUUCCUCUUUUUCUGAAA   1   *|*|||||||||||||=||| targets:2824   AUAAAGGAGAAAAAGAUUUU   2843 Target Full Sequence	2.5	Arabidopsis thaliana flocculation protein (DUF1296) mRNA	flocculation protein (DUF1296)(AT3G07660)	coding protein	psRNATarget
AK226998.1	ncRNA:20   CACUUCCUCUUUUUCUGAAA   1   *|*|||||||||||||=||| targets:2700   AUAAAGGAGAAAAAGAUUUU   2719 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL09-44-D10	NA	coding protein	psRNATarget
NM_001341194.1	ncRNA:20   CACUUCCUCUUUUUCUGAAA   1   *|||*|||||||=||||||| targets:326   UUGACGGAGAAAGAGACUUU   345 Target Full Sequence	2.5	Arabidopsis thaliana farnesyl diphosphate synthase 2 (FPS2), mRNA	farnesyl diphosphate synthase 2(FPS2)	coding protein	psRNATarget
NM_117823.4	ncRNA:20   CACUUCCUCUUUUUCUGAAA   1   *|||*|||||||=||||||| targets:246   UUGACGGAGAAAGAGACUUU   265 Target Full Sequence	2.5	Arabidopsis thaliana farnesyl diphosphate synthase 2 (FPS2), mRNA	farnesyl diphosphate synthase 2(FPS2)	coding protein	psRNATarget
NM_202836.2	ncRNA:20   CACUUCCUCUUUUUCUGAAA   1   *|||*|||||||=||||||| targets:259   UUGACGGAGAAAGAGACUUU   278 Target Full Sequence	2.5	Arabidopsis thaliana farnesyl diphosphate synthase 2 (FPS2), mRNA	farnesyl diphosphate synthase 2(FPS2)	coding protein	psRNATarget
AY072207.1	ncRNA:20   CACUUCCUCUUUUUCUGAAA   1   *|||*|||||||=||||||| targets:245   UUGACGGAGAAAGAGACUUU   264 Target Full Sequence	2.5	Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase FPS2 (At4g17190) mRNA, complete cds	NA	coding protein	psRNATarget
L46349.1	ncRNA:20   CACUUCCUCUUUUUCUGAAA   1   *|||*|||||||=||||||| targets:245   UUGACGGAGAAAGAGACUUU   264 Target Full Sequence	2.5	Arabidopsis thaliana farnesyl diphosphate synthase (FPS2) mRNA, complete cds	NA	coding protein	psRNATarget
BX827727.1	ncRNA:20   CACUUCCUCUUUUUCUGAAA   1   *|||*|||||||=||||||| targets:204   UUGACGGAGAAAGAGACUUU   223 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH15ZF05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY117354.1	ncRNA:20   CACUUCCUCUUUUUCUGAAA   1   *|||*|||||||=||||||| targets:199   UUGACGGAGAAAGAGACUUU   218 Target Full Sequence	2.5	Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase FPS2 (At4g17190) mRNA, complete cds	NA	coding protein	psRNATarget