ncRNA ID | novel_bra_miR814 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:8169399-8169471 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485262 |
Length | 24 |
Mature sequence(if miRNA) | 50 - UUUUAUAACUGUUAAAACUGCACC - 73 |
Stem-loop(if miRNA) |
--C     --         C      C C  C         GCAGU  UAACAGUUA AAAAAU U UA AUAUAA    |||||  ||||||||| |||||| | || |||||U    CGUCA  AUUGUCAAU UUUUUA A AU UAUAUA CCA     AA         A      C U  C      |
Stem-loop sequence | CGCAGUUAACAGUUACAAAAAUCUCUACAUAUAAUAUAUAUCUAUACAUUUUUAUAACUGUUAAAACUGCACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018657223.1 |
|
2.0 | PREDICTED: Brassica rapa spermidine coumaroyl-CoA acyltransferase-like (LOC108871125), mRNA | NA | coding protein | psRNATarget |