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BaseInfo

ncRNA ID	novel_bra_miR813
Species	Brassica rapa
Class	miRNA
Genome position	ChrA8:818373-818454 [-]
Reference genome	Brapa_1.0
Source	SRR1485262
Length	20
Mature sequence(if miRNA)	1 - GCAAGUUGAUUUUGGCUCUG - 20
Stem-loop(if miRNA)	--         A          AUUUUACU   UG -   UAAA   GAGCCAAAG UGACUUGCCG        GAU  A GUC    A   ||||||||| ||||||||||        |||  | |||    A   CUCGGUUUU GUUGAACGGC        UUA  U UAG    A GU         A          ------CG   GU A   UCAA
Stem-loop sequence	GAGCCAAAGAUGACUUGCCGAUUUUACUGAUUGAGUCUAAAAAAAACUGAUAUUGAUUGCCGGCAAGUUGAUUUUGGCUCUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009133210.2	ncRNA:20   GUCUCGGUUUUAGUUGAACG   1   *||||*||||*||||||||| targets:386   AAGAGGCAAAUUCAACUUGC   405 Target Full Sequence	2.5	PREDICTED: Brassica rapa myb-related protein Hv1-like (LOC103856130), mRNA	myb-related protein Hv1-like(LOC103856130)	coding protein	psRNATarget
XM_009123336.2	ncRNA:20   GUCUCGGUUUUAGUUGAACG   1   *||||*||||*||||||||| targets:463   AAGAGGCAAAUUCAACUUGC   482 Target Full Sequence	2.5	PREDICTED: Brassica rapa myb-related protein Hv1 (LOC103846421), mRNA	myb-related protein Hv1(LOC103846421)	coding protein	psRNATarget
XM_009127796.2	ncRNA:20   GUCUCGGUUUUAGUUGAACG   1   *||||*||||*||||||||| targets:623   AAGAGGCAAAUUCAACUUGC   642 Target Full Sequence	2.5	PREDICTED: Brassica rapa transcription factor MYB34-like (LOC103850980), mRNA	transcription factor MYB34-like(LOC103850980)	coding protein	psRNATarget