Search result

BaseInfo

ncRNA ID novel_bra_miR810
Species Brassica rapa
Class miRNA
Genome position ChrA7:5497325-5497526 [-]
Reference genome Brapa_1.0
Source SRR1485262
Length 24
Mature sequence(if miRNA) 179 - AGGAACCUGUGUCGUUCGUCUGUC - 202
Stem-loop(if miRNA) --         U                             A                             C                            G
  AGGAACCUG GUCGUUCGUCUGUCUGCCAAUUCAGUGGA CGACAAGGAGAAAGUGGACGGAAGUGCAG UGGUUUGUACUUGAGAGGAACCUUUGAC A
  ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
  UCCUUGGAC CAGUAAGCAGACAGACGGUUAAGUCACCU GCUGUUCCUCUUUCACCUGCCUUCACGUC ACCAAAUAUGAACUCUCCUUGGAGGCUG U
AU         U                             C                             A                            G
Stem-loop sequence AGGAACCUGUGUCGUUCGUCUGUCUGCCAAUUCAGUGGAACGACAAGGAGAAAGUGGACGGAAGUGCAGCUGGUUUGUACUUGAGAGGAACCUUUGACGAUGGUCGGAGGUUCCUCUCAAGUAUAAACCAACUGCACUUCCGUCCACUUUCUCCUUGUCGCUCCACUGAAUUGGCAGACAGACGAAUGACUCAGGUUCCUUA