ncRNA ID | novel_bra_miR807 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:12772166-12772242 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1125021 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGAACCGUCUCUUAAAUAAAAGA - 24 |
Stem-loop(if miRNA) |
--UC     A                        AAAU     UUAUU AAGAGACGGUUCUUAGUUUUUCUU    U     ||||| ||||||||||||||||||||||||    U     AAUAA UUCUCUGCCAAGAAUCAAAAAGAA    U AGAA     A                        GCAA |
Stem-loop sequence | UCUUAUUAAAGAGACGGUUCUUAGUUUUUCUUAAAUUUUAACGAAGAAAAACUAAGAACCGUCUCUUAAAUAAAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009151904.2 |
|
1.5 | PREDICTED: Brassica rapa UPF0160 protein (LOC103873492), mRNA | UPF0160 protein(LOC103873492) | coding protein | psRNATarget |