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BaseInfo

ncRNA ID	novel_bra_miR794
Species	Brassica rapa
Class	miRNA
Genome position	ChrA3:25340211-25340374 [+]
Reference genome	Brapa_1.0
Source	SRR1485260
Length	24
Mature sequence(if miRNA)	1 - GUUAGAGCAUCUCCAAAAGAAACU - 24
Stem-loop(if miRNA)	--                                                             U                 A   GUUAGAGCAUCUCCAAAAGAAACUCUAUAACUCCAAAUAUAGAGUUUUUUGUUCUCCAAAA GGAACUUCAAAACUUCA A   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   CAAUCUCGUAGAGGUUUUCUUUGAGAUAUUGAGGUUUAUAUCUCAAAAAACAAGAGGUUUU CCUUGAAGUUUUGAAGU U AA                                                             U                 U
Stem-loop sequence	GUUAGAGCAUCUCCAAAAGAAACUCUAUAACUCCAAAUAUAGAGUUUUUUGUUCUCCAAAAUGGAACUUCAAAACUUCAAAUUUGAAGUUUUGAAGUUCCUUUUUGGAGAACAAAAAACUCUAUAUUUGGAGUUAUAGAGUUUCUUUUGGAGAUGCUCUAACAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018658296.1	ncRNA:24   UCAAAGAAAACCUCUACGAGAUUG   1   ||||*||*||||||*||||||||| targets:5289   AGUUGCUGUUGGAGCUGCUCUAAC   5312 Target Full Sequence	2.5	PREDICTED: Brassica rapa uncharacterized LOC108871610 (LOC108871610), mRNA	NA	coding protein	psRNATarget
XM_009147850.2	ncRNA:24   UCAAAGAAAA-CCUCUACGAGAUUG   1   *|||||||||-|||||||||||||* targets:128   UGUUUCUUUUUGGAGAUGCUCUAAG   152 Target Full Sequence	3.0	PREDICTED: Brassica rapa F-box/kelch-repeat protein At2g22050-like (LOC103869772), mRNA	F-box/kelch-repeat protein At2g22050-like(LOC103869772)	coding protein	psRNATarget