ncRNA ID | novel_bra_miR785 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:4515897-4516033 [-] |
Reference genome | Brapa_1.0 |
Source | SRR2912894 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGGCAAUGCUUCCUGUGUCAA - 21 |
Stem-loop(if miRNA) |
--   -     U    AA  UG    U   U       AAUCA     AG AGUGCUGCGGGCAAGCCGAU   GAC UAGGA GGCA  GC  CGUG GGA GGAAGUC     UUUGG  U                    U   ||| ||||| ||||  ||  |||| ||| |||||||     |||||  |                    U   CUG GUCCU UCGU  CG  GUAC CUU CCUUCGG     UAUUA  G                    C AA   U     -    AA  GU    U   -       -AAAC     -- GUAUUCUGGUGCGAAACCAU |
Stem-loop sequence | GACUAGGAUGGCAAAGCUGCGUGUGGAUGGAAGUCAAUCAUUUGGAGUAGUGCUGCGGGCAAGCCGAUUUCUACCAAAGCGUGGUCUUAUGGAUUAUCAAAGGCUUCCUUCUCAUGUGGCAAUGCUUCCUGUGUCAA |