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BaseInfo

ncRNA ID novel_bra_miR785
Species Brassica rapa
Class miRNA
Genome position ChrA3:4515897-4516033 [-]
Reference genome Brapa_1.0
Source SRR2912894
Length 21
Mature sequence(if miRNA) 1 - UGGCAAUGCUUCCUGUGUCAA - 21
Stem-loop(if miRNA) --   -     U    AA  UG    U   U       AAUCA     AG AGUGCUGCGGGCAAGCCGAU
  GAC UAGGA GGCA  GC  CGUG GGA GGAAGUC     UUUGG  U                    U
  ||| ||||| ||||  ||  |||| ||| |||||||     |||||  |                    U
  CUG GUCCU UCGU  CG  GUAC CUU CCUUCGG     UAUUA  G                    C
AA   U     -    AA  GU    U   -       -AAAC     -- GUAUUCUGGUGCGAAACCAU
Stem-loop sequence GACUAGGAUGGCAAAGCUGCGUGUGGAUGGAAGUCAAUCAUUUGGAGUAGUGCUGCGGGCAAGCCGAUUUCUACCAAAGCGUGGUCUUAUGGAUUAUCAAAGGCUUCCUUCUCAUGUGGCAAUGCUUCCUGUGUCAA