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BaseInfo

ncRNA ID	ath-miRf10790-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UCGACCUCGAGGUCGAGUGA - NA
Stem-loop(if miRNA)	A         AA  G   -GA  G   G CACUCGACCUCG GGUCGAGUG  GU AUC   GU ACC U |||||||||||| |||||||||  || |||   || ||| GUGAGCUGGGGC CCAGCUCAC  UA UAG   UA UGG C             A         GG  G   AGG  G   U
Stem-loop sequence	CACUCGACCUCGAGGUCGAGUGAAGUGAUCGAGUGACCGUCUGGUGAUGGAGAUGAUGGCACUCGACCACGGGGUCGAGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183005.1	ncRNA:20   AGUGAGCUGGAGCUCCAGCU   1   *||||||||||||||||||| targets:1864   GCACUCGACCUCGAGGUCGA   1883 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:20   AGUGAGCUGGAGCUCCAGCU   1   ||||||||||*||||||||| targets:1617   UCACUCGACCCCGAGGUCGA   1636 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:20   AGUGAGCUGGAGCUCCAGCU   1   ||||||||||||||||*||| targets:1675   UCACUCGACCUCGAGGCCGA   1694 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:20   AGUGAGCUGGAGCUCCAGCU   1   *|||||||||*||||||||| targets:1526   CCACUCGACCACGAGGUCGA   1545 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:20   AGUGAGCUGGAGCUCCAGCU   1   *|||||||||*||||||||| targets:1059   GCACUCGACCCCGAGGUCGA   1078 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:20   AGUGAGCUGGAGCUCCAGCU   1   *|||||||||*||||||||| targets:1150   CCACUCGACCACGAGGUCGA   1169 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY227642.1	ncRNA:20   AGUGAGCUGGAGCUCCAGCU   1   *|||||||||*||||||||| targets:854   CCACUCGACCCCGAGGUCGA   873 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
AY227642.1	ncRNA:20   AGUGAGCUGGAGCUCCAGCU   1   ||||||*||||*|||||||| targets:926   UCACUCUACCUAGAGGUCGA   945 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget