ncRNA ID | novel_bra_miR781 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:15830863-15831054 [-] |
Reference genome | Brapa_1.0 |
Source | SRR2912894 |
Length | 24 |
Mature sequence(if miRNA) | 169 - AACAAAGUAUUGUCAAAUAAUAUU - 192 |
Stem-loop(if miRNA) |
--AAC             A A         C                     -            A  A      CA       A    AAGA    UC      AAAGUAUUGUCAA U AUAUUAUGU UUUAAAAUAAAAAGAUAAAAA UAAAUAAAAAUA UA UAGUUA  AAAAAAA AUUU    UGUA  U      ||||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||||| || ||||||  ||||||| ||||    ||||      UUUUAUAACAGUU A UAUAAUACA AAAUUUUAUUUUUUUAUUUUU AUUUAUUUUUAU AU AUCAAU  UUUUUUU UAAA    ACAU  U CUUUA             C A         A                     U            C  C      --       C    ---A    UU |
Stem-loop sequence | AACAAAGUAUUGUCAAAUAAUAUUAUGUCUUUAAAAUAAAAAGAUAAAAAUAAAUAAAAAUAAUAAUAGUUACAAAAAAAAAAUUUAAGAUGUAUCUUUUUACAAAAAUCUUUUUUUUAACUACUACUAUUUUUAUUUAUUUUUUAUUUUUUUAUUUUAAAAACAUAAUAUAACUUGACAAUAUUUUAUUUC |