Search result

BaseInfo

ncRNA ID novel_bra_miR771
Species Brassica rapa
Class miRNA
Genome position ChrA10:16671094-16671252 [+]
Reference genome Brapa_1.0
Source SRR2912894
Length 20
Mature sequence(if miRNA) 140 - CCACGGGCGAGUGAACGGAC - 159
Stem-loop(if miRNA) --          A           U  C    U A     -----U                 A   G             UU
  CCGUUUACUC GCCUGUGGGCC CA UUCG G GACGG      CAGUGUGUUAAUUUUCC AAG CUCGAAAGUCGUG  U
  |||||||||| ||||||||||| || |||| | |||||      ||||||||||||||||| ||| |||||||||||||  A
  GGCAAGUGAG CGGGCACCCGG GU AAGC C CUGCC      GUCACGUAAUUAAAAGG UUC GAGCUUUCAGUAU  C
CA          -           -  A    - G     CACCAC                 C   A             GU
Stem-loop sequence CCGUUUACUCAGCCUGUGGGCCUCACUUCGUGAGACGGUCAGUGUGUUAAUUUUCCAAAGGCUCGAAAGUCGUGUUUACUGUAUGACUUUCGAGACUUCGGAAAAUUAAUGCACUGCACCACCCGUCGCCGAAAUGGGCCCACGGGCGAGUGAACGGAC