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BaseInfo

ncRNA ID novel_bra_miR769
Species Brassica rapa
Class miRNA
Genome position ChrA4:13492761-13492920 [-]
Reference genome Brapa_1.0
Source SRR2912893
Length 24
Mature sequence(if miRNA) 1 - AGUUUCUUUUGGAGAUGCUCUAAG - 24
Stem-loop(if miRNA) --                                                                             A
  UAGAGCAUCUCCAAAAGAAACUCUAUAACUCCAAAUAUAGAGUUUUUUGCUCUCCAAAAAGGAACUUCAAAACUUCA A
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  AUCUCGUAGAGGUUUUCUUUGAGAUAUUGAGGUUUAUAUCUCAAAAAACGAGAGGUUUUUCCUUGAAGUUUUGAAGU U
GA                                                                             U
Stem-loop sequence UAGAGCAUCUCCAAAAGAAACUCUAUAACUCCAAAUAUAGAGUUUUUUGCUCUCCAAAAAGGAACUUCAAAACUUCAAAUUUGAAGUUUUGAAGUUCCUUUUUGGAGAGCAAAAAACUCUAUAUUUGGAGUUAUAGAGUUUCUUUUGGAGAUGCUCUAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009144332.2
ncRNA:24   GAAUCUCGUAGAGGUUUUCUUUGA   1
  **||*||*|||||||||||=||||
targets:855   AGUACAGAAUCUCCAAAAGGAACU   878

2.5 PREDICTED: Brassica rapa pectin acetylesterase 3 (LOC103866417), mRNA pectin acetylesterase 3(LOC103866417) coding protein psRNATarget