ncRNA ID | novel_bra_miR767 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:7674654-7674737 [+] |
Reference genome | Brapa_1.0 |
Source | SRR2912893 |
Length | 21 |
Mature sequence(if miRNA) | 64 - AUUAGAAUUUCAUAUGUCAAU - 84 |
Stem-loop(if miRNA) |
--                                       A   UGACAUAUGAAAUUCUAAUACAUACAUAUAUAUAUAUCU U   |||||||||||||||||||||||||||||||||||||||   ACUGUAUACUUUAAGAUUAUGUAUGUAUAUAUAUAUAGA A UA                                       U |
Stem-loop sequence | UGACAUAUGAAAUUCUAAUACAUACAUAUAUAUAUAUCUAUAUAGAUAUAUAUAUAUGUAUGUAUUAGAAUUUCAUAUGUCAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009130453.1 |
|
2.5 | PREDICTED: Brassica rapa oligopeptide transporter 7-like (LOC103853546), mRNA | oligopeptide transporter 7-like(LOC103853546) | coding protein | psRNATarget | |||||||||
XM_009133630.2 |
|
3.0 | PREDICTED: Brassica rapa putative fatty acyl-CoA reductase 7 (LOC103856516), transcript variant X1, mRNA | putative fatty acyl-CoA reductase 7(LOC103856516) | coding protein | psRNATarget | |||||||||
XM_009133631.2 |
|
3.0 | PREDICTED: Brassica rapa putative fatty acyl-CoA reductase 7 (LOC103856516), transcript variant X2, mRNA | putative fatty acyl-CoA reductase 7(LOC103856516) | coding protein | psRNATarget |