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BaseInfo

ncRNA ID novel_bra_miR767
Species Brassica rapa
Class miRNA
Genome position ChrA4:7674654-7674737 [+]
Reference genome Brapa_1.0
Source SRR2912893
Length 21
Mature sequence(if miRNA) 64 - AUUAGAAUUUCAUAUGUCAAU - 84
Stem-loop(if miRNA) --                                       A
  UGACAUAUGAAAUUCUAAUACAUACAUAUAUAUAUAUCU U
  |||||||||||||||||||||||||||||||||||||||
  ACUGUAUACUUUAAGAUUAUGUAUGUAUAUAUAUAUAGA A
UA                                       U
Stem-loop sequence UGACAUAUGAAAUUCUAAUACAUACAUAUAUAUAUAUCUAUAUAGAUAUAUAUAUAUGUAUGUAUUAGAAUUUCAUAUGUCAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009130453.1
ncRNA:21   UAACUGUAUACUUUAAGAUUA   1
  ***||||||||*|||||||||
targets:1805   CCAGACAUAUGUAAUUCUAAU   1825

2.5 PREDICTED: Brassica rapa oligopeptide transporter 7-like (LOC103853546), mRNA oligopeptide transporter 7-like(LOC103853546) coding protein psRNATarget
XM_009133630.2
ncRNA:21   UAACUGUAUACUUUAAGAUUA   1
  |**||=||||||||||||||*
targets:1212   ACAGAUAUAUGAAAUUCUAAA   1232

3.0 PREDICTED: Brassica rapa putative fatty acyl-CoA reductase 7 (LOC103856516), transcript variant X1, mRNA putative fatty acyl-CoA reductase 7(LOC103856516) coding protein psRNATarget
XM_009133631.2
ncRNA:21   UAACUGUAUACUUUAAGAUUA   1
  |**||=||||||||||||||*
targets:1211   ACAGAUAUAUGAAAUUCUAAA   1231

3.0 PREDICTED: Brassica rapa putative fatty acyl-CoA reductase 7 (LOC103856516), transcript variant X2, mRNA putative fatty acyl-CoA reductase 7(LOC103856516) coding protein psRNATarget