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BaseInfo

ncRNA ID	novel_bra_miR766
Species	Brassica rapa
Class	miRNA
Genome position	ChrA2:21337501-21337582 [-]
Reference genome	Brapa_1.0
Source	SRR2912893
Length	21
Mature sequence(if miRNA)	1 - AGUUACUCUAUUUUAGUGUGA - 21
Stem-loop(if miRNA)	--                            AGC      UGC   ACACUAAAAUAGAGUAACUCUAUUAUAG   UGAAUU   U   ||||||||||||||||||||||||||||   ||||||   C   UGUGAUUUUAUCUCAUUGAGAUAAUAUC   ACUUGG   A AG                            ---      UAA
Stem-loop sequence	ACACUAAAAUAGAGUAACUCUAUUAUAGAGCUGAAUUUGCUCAAAUGGUUCACUAUAAUAGAGUUACUCUAUUUUAGUGUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009131655.2	ncRNA:21   AGUGUGAUUUUAUCUCAUUGA   1   |=||||||||||||||||||| targets:1264   UUACACUAAAAUAGAGUAACU   1284 Target Full Sequence	0.0	PREDICTED: Brassica rapa non-functional pseudokinase ZED1 (LOC103854690), transcript variant X2, mRNA	non-functional pseudokinase ZED1(LOC103854690)	coding protein	psRNATarget
XM_009131654.2	ncRNA:21   AGUGUGAUUUUAUCUCAUUGA   1   |=||||||||||||||||||| targets:1333   UUACACUAAAAUAGAGUAACU   1353 Target Full Sequence	0.0	PREDICTED: Brassica rapa non-functional pseudokinase ZED1 (LOC103854690), transcript variant X1, mRNA	non-functional pseudokinase ZED1(LOC103854690)	coding protein	psRNATarget
XM_009103245.2	ncRNA:21   AGUGUGAUUUUAUCUCAUUGA   1   |=||*|||||=|||||||||| targets:2141   UUACUCUAAAGUAGAGUAACU   2161 Target Full Sequence	2.5	PREDICTED: Brassica rapa transcription factor MYC3 (LOC103827709), mRNA	transcription factor MYC3(LOC103827709)	coding protein	psRNATarget