ncRNA ID | novel_bra_miR762 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:10595014-10595056 [-] |
Reference genome | Brapa_1.0 |
Source | SRR2912893 |
Length | 21 |
Mature sequence(if miRNA) | 23 - UAGGUUCUCGGCUUAUAUGAC - 43 |
Stem-loop(if miRNA) |
--       UC    UAU   A   UAGGUUC  GGCU   AUG C   |||||||  ||||   ||| U   AUCCAAG  CUGG   UAC U CG       GA    --U   G |
Stem-loop sequence | UAGGUUCUCGGCUUAUAUGACUUGCAUUGGUCAGGAACCUAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009120160.2 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103843428 (LOC103843428), transcript variant X2, mRNA | uncharacterized LOC103843428(LOC103843428) | coding protein | psRNATarget | |||||||||
XM_009120159.2 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103843428 (LOC103843428), transcript variant X1, mRNA | uncharacterized LOC103843428(LOC103843428) | coding protein | psRNATarget |