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BaseInfo

ncRNA ID novel_bra_miR762
Species Brassica rapa
Class miRNA
Genome position ChrA9:10595014-10595056 [-]
Reference genome Brapa_1.0
Source SRR2912893
Length 21
Mature sequence(if miRNA) 23 - UAGGUUCUCGGCUUAUAUGAC - 43
Stem-loop(if miRNA) --       UC    UAU   A
  UAGGUUC  GGCU   AUG C
  |||||||  ||||   ||| U
  AUCCAAG  CUGG   UAC U
CG       GA    --U   G
Stem-loop sequence UAGGUUCUCGGCUUAUAUGACUUGCAUUGGUCAGGAACCUAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009120160.2
ncRNA:21   CAGUAUAUUCGGCUCUUGGAU   1
  **|||||||||=||||||||*
targets:1205   UACAUAUAAGCUGAGAACCUU   1225

2.5 PREDICTED: Brassica rapa uncharacterized LOC103843428 (LOC103843428), transcript variant X2, mRNA uncharacterized LOC103843428(LOC103843428) coding protein psRNATarget
XM_009120159.2
ncRNA:21   CAGUAUAUUCGGCUCUUGGAU   1
  **|||||||||=||||||||*
targets:1787   UACAUAUAAGCUGAGAACCUU   1807

2.5 PREDICTED: Brassica rapa uncharacterized LOC103843428 (LOC103843428), transcript variant X1, mRNA uncharacterized LOC103843428(LOC103843428) coding protein psRNATarget