ncRNA ID | novel_bra_miR760 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:9319014-9319095 [-] |
Reference genome | Brapa_1.0 |
Source | SRR2912893 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUGGUAACCAAUGUAUUUGAA - 21 |
Stem-loop(if miRNA) |
--                                C     G   CAAAUACAUUGGUUACCAUAUAUAUCCACUUU UUUUU G   |||||||||||||||||||||||||||||||| |||||   GUUUAUGUAACCAAUGGUAUAUAUAGGUGAAA AAAAA U AA                                A     C |
Stem-loop sequence | CAAAUACAUUGGUUACCAUAUAUAUCCACUUUCUUUUUGGUCAAAAAAAAAGUGGAUAUAUAUGGUAACCAAUGUAUUUGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009136318.2 |
|
2.5 | PREDICTED: Brassica rapa E3 ubiquitin-protein ligase RHA1B (LOC103858876), mRNA | E3 ubiquitin-protein ligase RHA1B(LOC103858876) | coding protein | psRNATarget | |||||||||
XM_009152068.1 |
|
3.0 | PREDICTED: Brassica rapa cation/H(+) antiporter 12-like (LOC103873668), mRNA | cation/H(+) antiporter 12-like(LOC103873668) | coding protein | psRNATarget |