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BaseInfo

ncRNA ID	ath-miRf10787-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - UACUCGACCAGGAGGUCGAGUG - NA
Stem-loop(if miRNA)	AGGA         A   G --U   A UACUCGACC    GGUCGAGUG UGU A   CAA U |||||||||    ||||||||| ||| |   ||| GUGAGCUGG    CCAGCUCAU GCG U   GUU G          GGGA         G   G UCU   A
Stem-loop sequence	UACUCGACCAGGAGGUCGAGUGAUGUGAUCAAAUGAUUGUCUUGGCGGUACUCGACCAGGGGGUCGAGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069808.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   |||||||||*|||||||||||| targets:91   CACUCGACCCCCUGGUCGAGUA   112 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   |||||||||*|||||||||||| targets:231   CACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   =||||||||*|||||||||||| targets:182   UACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   |||||||||*|||||||||||| targets:231   CACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   =||||||||*|||||||||||| targets:182   UACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   |||||||||*|||||||||||| targets:125   CACUCGACCCCCUGGUCGAGUA   146 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   |||||||||*|||||||||||| targets:500   CACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   |||||||||*|||||||||||| targets:500   CACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   |||||||||*|||||||||||| targets:1572   CACUCGACCCCCUGGUCGAGUA   1593 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   =||||||||*|||||||||||| targets:309   UACUCGACCCCCUGGUCGAGUA   330 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT014714.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   =||||*|||*|||||||||||| targets:302   UACUCAACCCCCUGGUCGAGUA   323 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   =||||*|||*|||||||||||| targets:302   UACUCAACCCCCUGGUCGAGUA   323 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   =||||||||||=|||||||||= targets:2015   UACUCGACCUCUUGGUCGAGUG   2036 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   =||*|||||*|||||||||||| targets:584   UACYCGACCCCCUGGUCGAGUA   605 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
EF183311.1	ncRNA:22   GUGAGCUGGAGGACCAGCUCAU   1   =||||||*|||*|||||||||| targets:579   UACUCGAGCUCGUGGUCGAGUA   600 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence	NA	coding protein	psRNATarget