ncRNA ID | novel_bra_miR752 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:15466540-15466726 [+] |
Reference genome | Brapa_1.0 |
Source | SRR2912891 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GAUCGUCCCGCUCGGUCGCUACA - 23 |
Stem-loop(if miRNA) |
--                      A              GAUUGA                   A   GG  U UG    GA           A   GAUCGUCCCGCUCGGUCGCUAC UAGCGACCGAGUGG      CGCUCGGUUGCUACGUAGC ACC  GC U  GCUC  GCUCGGUCGCU C   |||||||||||||||||||||| ||||||||||||||      ||||||||||||||||||| |||  || |  ||||  |||||||||||   CUAGCAGGGCGAGCCAGCGAUG AUCGCUGGCUCGCU      GCGAGCCAGCGGUGCGUUG UGG  CG A  CGGG  CGAGCCAGCGA G CG                      C              AGCAGG                   C   GG  - GU    GG           U |
Stem-loop sequence | GAUCGUCCCGCUCGGUCGCUACAUAGCGACCGAGUGGGAUUGACGCUCGGUUGCUACGUAGCAACCGGGCUUUGGCUCGAGCUCGGUCGCUACGUAGCGACCGAGCGGGGGCUGAGCGGGGUCGUUGCGUGGCGACCGAGCGGGACGAUCGCUCGGUCGCUACGUAGCGACCGAGCGGGACGAUCGC |