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BaseInfo

ncRNA ID novel_bra_miR749
Species Brassica rapa
Class miRNA
Genome position ChrA5:8640990-8641197 [-]
Reference genome Brapa_1.0
Source SRR2912891
Length 24
Mature sequence(if miRNA) 185 - AAAUAAAUAUUGAUUAGUUUUAUG - 208
Stem-loop(if miRNA) --      -AU            --     CCAACAUAUCAUAUAAUAUAAGACAUGGUAGUAAUUUAGAGCCUUUUUAUCGUCAGAUUUUUGUUUAUUGGUGUA
  AAAUAA   AUUGAUUAGUUU  UAUGA                                                                           A
  ||||||   ||||||||||||  |||||                                                                           U
  UUUAUU   UGAUUAGUCAAA  UAUAU                                                                           C
AU      AUU            GA     UUAUAAUAAUUAUUAUAAUGAAGUAUCAUUAUGUUGGUCUCAUUGGAUGUCUCAGUCGUUGUUUACGGUUACGAA
Stem-loop sequence AAAUAAAUAUUGAUUAGUUUUAUGACCAACAUAUCAUAUAAUAUAAGACAUGGUAGUAAUUUAGAGCCUUUUUAUCGUCAGAUUUUUGUUUAUUGGUGUAAUCAAGCAUUGGCAUUUGUUGCUGACUCUGUAGGUUACUCUGGUUGUAUUACUAUGAAGUAAUAUUAUUAAUAAUAUUUAUAUAGAAACUGAUUAGUUUAUUAUUUUA