ncRNA ID | novel_bra_miR749 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:8640990-8641197 [-] |
Reference genome | Brapa_1.0 |
Source | SRR2912891 |
Length | 24 |
Mature sequence(if miRNA) | 185 - AAAUAAAUAUUGAUUAGUUUUAUG - 208 |
Stem-loop(if miRNA) |
--      -AU            --     CCAACAUAUCAUAUAAUAUAAGACAUGGUAGUAAUUUAGAGCCUUUUUAUCGUCAGAUUUUUGUUUAUUGGUGUA   AAAUAA   AUUGAUUAGUUU  UAUGA                                                                           A   ||||||   ||||||||||||  |||||                                                                           U   UUUAUU   UGAUUAGUCAAA  UAUAU                                                                           C AU      AUU            GA     UUAUAAUAAUUAUUAUAAUGAAGUAUCAUUAUGUUGGUCUCAUUGGAUGUCUCAGUCGUUGUUUACGGUUACGAA |
Stem-loop sequence | AAAUAAAUAUUGAUUAGUUUUAUGACCAACAUAUCAUAUAAUAUAAGACAUGGUAGUAAUUUAGAGCCUUUUUAUCGUCAGAUUUUUGUUUAUUGGUGUAAUCAAGCAUUGGCAUUUGUUGCUGACUCUGUAGGUUACUCUGGUUGUAUUACUAUGAAGUAAUAUUAUUAAUAAUAUUUAUAUAGAAACUGAUUAGUUUAUUAUUUUA |