ncRNA ID | novel_bra_miR748 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:13492759-13492922 [-] |
Reference genome | Brapa_1.0 |
Source | SRR2912891 |
Length | 24 |
Mature sequence(if miRNA) | 141 - CUUAGAGCAUCUCCAAAAGAAACU - 164 |
Stem-loop(if miRNA) |
--                                                                               A   CUUAGAGCAUCUCCAAAAGAAACUCUAUAACUCCAAAUAUAGAGUUUUUUGCUCUCCAAAAAGGAACUUCAAAACUUCA A   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   GAAUCUCGUAGAGGUUUUCUUUGAGAUAUUGAGGUUUAUAUCUCAAAAAACGAGAGGUUUUUCCUUGAAGUUUUGAAGU U GU                                                                               U |
Stem-loop sequence | CUUAGAGCAUCUCCAAAAGAAACUCUAUAACUCCAAAUAUAGAGUUUUUUGCUCUCCAAAAAGGAACUUCAAAACUUCAAAUUUGAAGUUUUGAAGUUCCUUUUUGGAGAGCAAAAAACUCUAUAUUUGGAGUUAUAGAGUUUCUUUUGGAGAUGCUCUAAGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009147850.2 |
|
2.0 | PREDICTED: Brassica rapa F-box/kelch-repeat protein At2g22050-like (LOC103869772), mRNA | F-box/kelch-repeat protein At2g22050-like(LOC103869772) | coding protein | psRNATarget |