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BaseInfo

ncRNA ID novel_bra_miR748
Species Brassica rapa
Class miRNA
Genome position ChrA4:13492759-13492922 [-]
Reference genome Brapa_1.0
Source SRR2912891
Length 24
Mature sequence(if miRNA) 141 - CUUAGAGCAUCUCCAAAAGAAACU - 164
Stem-loop(if miRNA) --                                                                               A
  CUUAGAGCAUCUCCAAAAGAAACUCUAUAACUCCAAAUAUAGAGUUUUUUGCUCUCCAAAAAGGAACUUCAAAACUUCA A
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  GAAUCUCGUAGAGGUUUUCUUUGAGAUAUUGAGGUUUAUAUCUCAAAAAACGAGAGGUUUUUCCUUGAAGUUUUGAAGU U
GU                                                                               U
Stem-loop sequence CUUAGAGCAUCUCCAAAAGAAACUCUAUAACUCCAAAUAUAGAGUUUUUUGCUCUCCAAAAAGGAACUUCAAAACUUCAAAUUUGAAGUUUUGAAGUUCCUUUUUGGAGAGCAAAAAACUCUAUAUUUGGAGUUAUAGAGUUUCUUUUGGAGAUGCUCUAAGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009147850.2
ncRNA:24   UCAAAGAAAA-CCUCUACGAGAUUC   1
  *|||||||||-||||||||||||||
targets:128   UGUUUCUUUUUGGAGAUGCUCUAAG   152

2.0 PREDICTED: Brassica rapa F-box/kelch-repeat protein At2g22050-like (LOC103869772), mRNA F-box/kelch-repeat protein At2g22050-like(LOC103869772) coding protein psRNATarget