ncRNA ID | novel_bra_miR746 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:8785882-8786089 [+] |
Reference genome | Brapa_1.0 |
Source | SRR2912891 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUAAAUAUUGAUUAGUUUUAUG - 24 |
Stem-loop(if miRNA) |
--      -AU             AUGACCAA     CAUAUAAUAUGAGACAUAGUAGUAAUUUAGAGCCUUUUUAUCGUCAGAUUUUUGUUUAUUGGUGUAAU   AAAUAA   AUUGAUUAGUUUU        CAUAU                                                                    C   ||||||   |||||||||||||        |||||                                                                    A   UUUAUU   UGAUUAGUCAAAG        UUAUA                                                                    A AU      AUU             --AUAUAU     AUAAUUAUUAUAAUGAAGUAUCAUUAUGUUGGUCUCAUUGGAUGUCUCAGUCGUUGUUUACGGUUACG |
Stem-loop sequence | AAAUAAAUAUUGAUUAGUUUUAUGACCAACAUAUCAUAUAAUAUGAGACAUAGUAGUAAUUUAGAGCCUUUUUAUCGUCAGAUUUUUGUUUAUUGGUGUAAUCAAGCAUUGGCAUUUGUUGCUGACUCUGUAGGUUACUCUGGUUGUAUUACUAUGAAGUAAUAUUAUUAAUAAUAUUUAUAUAGAAACUGAUUAGUUUAUUAUUUUA |