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BaseInfo

ncRNA ID novel_bra_miR746
Species Brassica rapa
Class miRNA
Genome position ChrA4:8785882-8786089 [+]
Reference genome Brapa_1.0
Source SRR2912891
Length 24
Mature sequence(if miRNA) 1 - AAAUAAAUAUUGAUUAGUUUUAUG - 24
Stem-loop(if miRNA) --      -AU             AUGACCAA     CAUAUAAUAUGAGACAUAGUAGUAAUUUAGAGCCUUUUUAUCGUCAGAUUUUUGUUUAUUGGUGUAAU
  AAAUAA   AUUGAUUAGUUUU        CAUAU                                                                    C
  ||||||   |||||||||||||        |||||                                                                    A
  UUUAUU   UGAUUAGUCAAAG        UUAUA                                                                    A
AU      AUU             --AUAUAU     AUAAUUAUUAUAAUGAAGUAUCAUUAUGUUGGUCUCAUUGGAUGUCUCAGUCGUUGUUUACGGUUACG
Stem-loop sequence AAAUAAAUAUUGAUUAGUUUUAUGACCAACAUAUCAUAUAAUAUGAGACAUAGUAGUAAUUUAGAGCCUUUUUAUCGUCAGAUUUUUGUUUAUUGGUGUAAUCAAGCAUUGGCAUUUGUUGCUGACUCUGUAGGUUACUCUGGUUGUAUUACUAUGAAGUAAUAUUAUUAAUAAUAUUUAUAUAGAAACUGAUUAGUUUAUUAUUUUA