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BaseInfo

ncRNA ID novel_bra_miR745
Species Brassica rapa
Class miRNA
Genome position ChrA3:24185004-24185183 [-]
Reference genome Brapa_1.0
Source SRR2912891;SRR1485275
Length 21
Mature sequence(if miRNA) 160 - AAUUAGCAUACAGCUUCUGGU - 180
Stem-loop(if miRNA) ---AA          G              ----------                                         GU  CCAUG  -   UU
     UUAGCAUACA CUUCUGGUUUCAUC          UCACAACAGAAUCAAUUCAGUUAUUAAUGUAUGGCUGUUAU  GG     UC UCA  G
     |||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||  ||     || |||
     AAUCGUAUGU GAAGACCAAAGUAG          AGUGUUGUCUUGGUUAAGUUAAUAAUUACAUACCGACAAUA  CC     AG AGU  U
GGUUA          A              ACGUGUAGCA                                         GU  ----A  U   UC
Stem-loop sequence AAUUAGCAUACAGCUUCUGGUUUCAUCUCACAACAGAAUCAAUUCAGUUAUUAAUGUAUGGCUGUUAUGUGGCCAUGUCUCAUUGUCUUGAUGAACCUGAUAACAGCCAUACAUUAAUAAUUGAAUUGGUUCUGUUGUGAACGAUGUGCAGAUGAAACCAGAAGAUGUAUGCUAAAUUGG