ncRNA ID | novel_bra_miR745 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:24185004-24185183 [-] |
Reference genome | Brapa_1.0 |
Source | SRR2912891;SRR1485275 |
Length | 21 |
Mature sequence(if miRNA) | 160 - AAUUAGCAUACAGCUUCUGGU - 180 |
Stem-loop(if miRNA) |
---AA          G              ----------                                         GU  CCAUG  -   UU      UUAGCAUACA CUUCUGGUUUCAUC          UCACAACAGAAUCAAUUCAGUUAUUAAUGUAUGGCUGUUAU  GG     UC UCA  G      |||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||  ||     || |||      AAUCGUAUGU GAAGACCAAAGUAG          AGUGUUGUCUUGGUUAAGUUAAUAAUUACAUACCGACAAUA  CC     AG AGU  U GGUUA          A              ACGUGUAGCA                                         GU  ----A  U   UC |
Stem-loop sequence | AAUUAGCAUACAGCUUCUGGUUUCAUCUCACAACAGAAUCAAUUCAGUUAUUAAUGUAUGGCUGUUAUGUGGCCAUGUCUCAUUGUCUUGAUGAACCUGAUAACAGCCAUACAUUAAUAAUUGAAUUGGUUCUGUUGUGAACGAUGUGCAGAUGAAACCAGAAGAUGUAUGCUAAAUUGG |