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BaseInfo

ncRNA ID	novel_bra_miR737
Species	Brassica rapa
Class	miRNA
Genome position	ChrA1:17169306-17169420 [+]
Reference genome	Brapa_1.0
Source	SRR2912891;SRR2912894;SRR1485275
Length	21
Mature sequence(if miRNA)	95 - AUCGUUAGCUUUGUUGAAAUU - 115
Stem-loop(if miRNA)	--               A                  A  AC UUUGUUGAAAUAUCUC   UUUCAACAAAGCUAA GAUCUCAAGAAAAAAAAA GA  U                A   ||||||||||||||| |||||||||||||||||| ||  |   AAAGUUGUUUCGAUU CUAGGGUUCUUUUUUUUU CU  C                A UU               G                  -  AA ACAAGAAAAAAAAAAG
Stem-loop sequence	UUUCAACAAAGCUAAAGAUCUCAAGAAAAAAAAAAGAACUUUUGUUGAAAUAUCUCAAGAAAAAAAAAAGAACACAAUCUUUUUUUUUCUUGGGAUCGUUAGCUUUGUUGAAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009133639.2	ncRNA:21   UUAAAGUUGUUUCGAUUGCUA   1   |=|||||=||||*|||||||| targets:347   AGUUUCAGCAAACCUAACGAU   367 Target Full Sequence	2.5	PREDICTED: Brassica rapa putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (LOC103856528), mRNA	putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2(LOC103856528)	coding protein	psRNATarget
XM_009113742.2	ncRNA:21   UUAAAGUUGUUUCGAUUGCUA   1   ==||||*=||||||||||||* targets:1032   GGUUUCUGCAAAGCUAACGAA   1052 Target Full Sequence	3.0	PREDICTED: Brassica rapa pentatricopeptide repeat-containing protein At5g61400 (LOC103837380), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At5g61400(LOC103837380)	coding protein	psRNATarget
XM_009113743.2	ncRNA:21   UUAAAGUUGUUUCGAUUGCUA   1   ==||||*=||||||||||||* targets:1032   GGUUUCUGCAAAGCUAACGAA   1052 Target Full Sequence	3.0	PREDICTED: Brassica rapa pentatricopeptide repeat-containing protein At5g61400 (LOC103837380), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At5g61400(LOC103837380)	coding protein	psRNATarget