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BaseInfo

ncRNA ID ath-miRf10785-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - AAGUGGUGAAGUCUUCUACUCGACC - NA
Stem-loop(if miRNA) U  -U      - AG    G A   -UU          -AGG  A        U U   AAGG
 GG  GAAGUG A  UGGU A GUC   CUACUCGACC    GG UCGAGUGG C GUU    U
 ||  |||||| |  |||| | |||   ||||||||||    || |||||||| | |||
 CC  CUUCGC U  ACUA U CAG   GGUGAGCUGG    CC AGUUCAUC G CGA    C
A  UU      C GG    G A   UUU          GGGA  -        U -   AGUG
Stem-loop sequence UGGUGAAGUGAAGUGGUGAAGUCUUCUACUCGACCAGGGGAUCGAGUGGUCUGUUAAGGUCGUGAAGCGUCUACUUGACCAGGGGGUCGAGUGGUUUGACAUGAUCAGGUCCGCUUCUUCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183194.1
ncRNA:25   CCAGCUCAUCUUCUGAAGUGGUGAA   1
  |||||||||||||||*|||||||||
targets:463   GGUCGAGUAGAAGACAUCACCACUU   487

1.5 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
DQ069808.1
ncRNA:25   CCAGCUCAUCUUCUGAAGUGGUGAA   1
  |||||||||||*||||||*||||||
targets:58   GGUCGAGUAGACGACUUCCCCACUU   82

2.5 Arabidopsis thaliana At2g10880 mRNA, partial sequence NA coding protein psRNATarget