ncRNA ID | novel_bra_miR730 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:7904998-7905171 [+] |
Reference genome | Brapa_1.0 |
Source | SRR2912891 |
Length | 23 |
Mature sequence(if miRNA) | 152 - CUACGUAGCGACCGAGCGGGACA - 174 |
Stem-loop(if miRNA) |
- -GA            U     C       C        A       A     U            GGA  -AA    C       A  G   UGCUCGGUCGUU CGUAG GACCGAG UUGGCCGA CUCGGUC CUACG AGCGACCGAGCG   CG   UGCU GGUCGCU C  |   |||||||||||| ||||| ||||||| |||||||| ||||||| ||||| ||||||||||||   ||   |||| |||||||  C   GCGAGCCAGCGA GCAUC CUGGCUC AGCCGGUU GAGCCAG GAUGC UUGCUGGCUCGU   GC   GCGA CCAGCGA G A AGG            U     A       A        C       C     U            -AG  AAG    A       U |
Stem-loop sequence | GGAUGCUCGGUCGUUUCGUAGCGACCGAGCUUGGCCGAACUCGGUCACUACGUAGCGACCGAGCGGGACGAAUGCUCGGUCGCUACGUAGCGACCAAGCGGAACGGAUGCUCGGUCGUUUCGUAGCGACCGAGCUUGGCCGAACUCGGUCACUACGUAGCGACCGAGCGGGACA |