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BaseInfo

ncRNA ID novel_bra_miR730
Species Brassica rapa
Class miRNA
Genome position ChrA8:7904998-7905171 [+]
Reference genome Brapa_1.0
Source SRR2912891
Length 23
Mature sequence(if miRNA) 152 - CUACGUAGCGACCGAGCGGGACA - 174
Stem-loop(if miRNA) - -GA            U     C       C        A       A     U            GGA  -AA    C       A
 G   UGCUCGGUCGUU CGUAG GACCGAG UUGGCCGA CUCGGUC CUACG AGCGACCGAGCG   CG   UGCU GGUCGCU C
 |   |||||||||||| ||||| ||||||| |||||||| ||||||| ||||| ||||||||||||   ||   |||| |||||||
 C   GCGAGCCAGCGA GCAUC CUGGCUC AGCCGGUU GAGCCAG GAUGC UUGCUGGCUCGU   GC   GCGA CCAGCGA G
A AGG            U     A       A        C       C     U            -AG  AAG    A       U
Stem-loop sequence GGAUGCUCGGUCGUUUCGUAGCGACCGAGCUUGGCCGAACUCGGUCACUACGUAGCGACCGAGCGGGACGAAUGCUCGGUCGCUACGUAGCGACCAAGCGGAACGGAUGCUCGGUCGUUUCGUAGCGACCGAGCUUGGCCGAACUCGGUCACUACGUAGCGACCGAGCGGGACA