ncRNA ID | novel_bra_miR716 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:22611814-22611878 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 42 - UCUUUGGUUGUUGGUCUAAGGCGA - 65 |
Stem-loop(if miRNA) |
--        U    GU UA   CGA         UCUUUGGU GUUG  C  AGG   UCGAAGU   |||||||| ||||  |  |||   ||||||U   AGGGACUA CAGC  G  UCC   AGCUUUA CA        C    UG GC   AAG       |
Stem-loop sequence | UCUUUGGUUGUUGGUCUAAGGCGAUCGAAGUUAUUUCGAGAACCUCGGGUCGACCAUCAGGGAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009138404.2 |
|
2.5 | PREDICTED: Brassica rapa cation/H(+) antiporter 28 (LOC103860741), transcript variant X2, mRNA | cation/H(+) antiporter 28(LOC103860741) | coding protein | psRNATarget | |||||||||
XM_018657954.1 |
|
2.5 | PREDICTED: Brassica rapa cation/H(+) antiporter 28 (LOC103860741), transcript variant X1, mRNA | NA | coding protein | psRNATarget |