ncRNA ID | novel_bra_miR715 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:26323077-26323270 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCCAAGGGUUUAGGGUUUCGGAU - 24 |
Stem-loop(if miRNA) |
--  U     A                C            ---     UC     -      GAUU      -U           AAAAUCA   U  A  AAAA   CC AAACC UAAACCCUUGGAUAAA CCUAAACUCUAG   GAAAA  CUAAA CUCUAG    AAUCCU  AACUCUAAAUC       CUA AC CU    C   || ||||| |||||||||||||||| ||||||||||||   |||||  ||||| ||||||    ||||||  |||||||||||       ||| || ||   GG UUUGG AUUUGGGAACCUAUUU GGAUUUGAGAUU   UUUUU  GAUUU GAGAUU    UUAGGA  UUGGGAUUUGG       GAU UG GA    A UA  C     G                A            UAU     GU     U      ----      UU           -------   U  C  ACUU |
Stem-loop sequence | CCUAAACCAUAAACCCUUGGAUAAACCCUAAACUCUAGGAAAAUCCUAAACUCUAGGAUUAAUCCUUAACUCUAAAUCAAAAUCACUAUACACUAAAACAUUCAAGCGUUUAGGGUUUAGGGUUUUAGGAUUUUAGAGUUUUAGUGUUUUUUAUUUAGAGUUUAGGAUUUAUCCAAGGGUUUAGGGUUUCGGAU |