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BaseInfo

ncRNA ID novel_bra_miR715
Species Brassica rapa
Class miRNA
Genome position ChrA1:26323077-26323270 [-]
Reference genome Brapa_1.0
Source SRR1777714
Length 24
Mature sequence(if miRNA) 1 - AUCCAAGGGUUUAGGGUUUCGGAU - 24
Stem-loop(if miRNA) --  U     A                C            ---     UC     -      GAUU      -U           AAAAUCA   U  A  AAAA
  CC AAACC UAAACCCUUGGAUAAA CCUAAACUCUAG   GAAAA  CUAAA CUCUAG    AAUCCU  AACUCUAAAUC       CUA AC CU    C
  || ||||| |||||||||||||||| ||||||||||||   |||||  ||||| ||||||    ||||||  |||||||||||       ||| || ||
  GG UUUGG AUUUGGGAACCUAUUU GGAUUUGAGAUU   UUUUU  GAUUU GAGAUU    UUAGGA  UUGGGAUUUGG       GAU UG GA    A
UA  C     G                A            UAU     GU     U      ----      UU           -------   U  C  ACUU
Stem-loop sequence CCUAAACCAUAAACCCUUGGAUAAACCCUAAACUCUAGGAAAAUCCUAAACUCUAGGAUUAAUCCUUAACUCUAAAUCAAAAUCACUAUACACUAAAACAUUCAAGCGUUUAGGGUUUAGGGUUUUAGGAUUUUAGAGUUUUAGUGUUUUUUAUUUAGAGUUUAGGAUUUAUCCAAGGGUUUAGGGUUUCGGAU