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BaseInfo

ncRNA ID novel_bra_miR713
Species Brassica rapa
Class miRNA
Genome position ChrA1:3535848-3535983 [+]
Reference genome Brapa_1.0
Source SRR1777714
Length 24
Mature sequence(if miRNA) 113 - GAGGAAAAUUCAUUUCGUCGGAAU - 136
Stem-loop(if miRNA) --         AA      --          AUA   -A  -AAU        C            A A  A
  UCCGACGGA  AUGAAU  UCCUCGGAAU   CCG  GG    UUCCGAGG AAUUCCGAGGAA C CA A
  |||||||||  ||||||  ||||||||||   |||  ||    |||||||| |||||||||||| | || A
  AGGCUGCUU  UACUUA  AGGAGCCUUA   GGC  CC    AAGGCUCC UUAAGGCUCCUU G GU U
UA         --      AA          --A   AG  AUAU        U            C -  U
Stem-loop sequence UCCGACGGAAAAUGAAUUCCUCGGAAUAUACCGAGGAAUUUCCGAGGCAAUUCCGAGGAAACACAAAAUUUGGCUUCCUCGGAAUUUCCUCGGAAUAUACCGACGGAAUUCCGAGGAAAAUUCAUUUCGUCGGAAU