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BaseInfo

ncRNA ID novel_bra_miR710
Species Brassica rapa
Class miRNA
Genome position ChrA8:12669081-12669216 [-]
Reference genome Brapa_1.0
Source SRR1777714
Length 24
Mature sequence(if miRNA) 1 - GAGGAAAAUUCAUUUCGUCGGAAU - 24
Stem-loop(if miRNA) --         AA      --          AUA   -A  -AAU        C            A  CAA
  UCCGACGGA  AUGAAU  UCCUCGGAAU   CCG  GG    UUCCGAGG AAUUCCGAGGAA CC   A
  |||||||||  ||||||  ||||||||||   |||  ||    |||||||| |||||||||||| ||
  AGGCUGCUU  UACUUA  AGGAGCCUUA   GGC  CC    AAGGCUCC UUAAGGCUCCUU GG   A
UA         --      AA          --A   AG  AUAU        U            C  UUU
Stem-loop sequence UCCGACGGAAAAUGAAUUCCUCGGAAUAUACCGAGGAAUUUCCGAGGCAAUUCCGAGGAAACCCAAAAUUUGGCUUCCUCGGAAUUUCCUCGGAAUAUACCGACGGAAUUCCGAGGAAAAUUCAUUUCGUCGGAAU