ncRNA ID | novel_bra_miR710 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:12669081-12669216 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAGGAAAAUUCAUUUCGUCGGAAU - 24 |
Stem-loop(if miRNA) |
--         AA      --          AUA   -A  -AAU        C            A  CAA   UCCGACGGA  AUGAAU  UCCUCGGAAU   CCG  GG    UUCCGAGG AAUUCCGAGGAA CC   A   |||||||||  ||||||  ||||||||||   |||  ||    |||||||| |||||||||||| ||   AGGCUGCUU  UACUUA  AGGAGCCUUA   GGC  CC    AAGGCUCC UUAAGGCUCCUU GG   A UA         --      AA          --A   AG  AUAU        U            C  UUU |
Stem-loop sequence | UCCGACGGAAAAUGAAUUCCUCGGAAUAUACCGAGGAAUUUCCGAGGCAAUUCCGAGGAAACCCAAAAUUUGGCUUCCUCGGAAUUUCCUCGGAAUAUACCGACGGAAUUCCGAGGAAAAUUCAUUUCGUCGGAAU |